Scraping web data in unstructured format

A common scenario for web scraping is when the data we want is available in plain html, but in different parts of the web, and not in a table format. In this scenario, we will need to find a way to extract each element, and then put it together into a data frame manually.

The motivating example here will be the website ipaidabribe.com, which contains a database of self-reports of bribes in India. We want to learn how much people were asked to pay for different services, and by which departments.

url <- 'http://ipaidabribe.com/reports/paid'

We will also be using rvest, but in a slightly different way: prior to scraping, we need to identify the CSS selector of each element we want to extract.

A very useful tool for this purpose is selectorGadget, an extension to the Google Chrome browser. Go to the following website to install it: http://selectorgadget.com/. Now, go back to the ipaidabribe website and open the extension. Then, click on the element you want to extract, and then on the rest of highlighted elements that you do not want to extract. After only the elements you’re interested in are highlighted, copy and paste the CSS selector into R.

Now we’re ready to scrape the website:

library(rvest, warn.conflicts=FALSE)
## Loading required package: xml2
bribes <- read_html(url) # reading the HTML code
amounts <- html_nodes(bribes, ".paid-amount span") # identify the CSS selector
amounts # content of CSS selector
## {xml_nodeset (10)}
##  [1] <span>Paid INR 1,500\r\n                        </span>
##  [2] <span>Paid INR 2,400\r\n                        </span>
##  [3] <span>Paid INR 5,000\r\n                        </span>
##  [4] <span>Paid INR 200\r\n                        </span>
##  [5] <span>Paid INR 15,000\r\n                        </span>
##  [6] <span>Paid INR 44,000\r\n                        </span>
##  [7] <span>Paid INR 200\r\n                        </span>
##  [8] <span>Paid INR 43,000\r\n                        </span>
##  [9] <span>Paid INR 3,000\r\n                        </span>
## [10] <span>Paid INR 2,000\r\n                        </span>
html_text(amounts)
##  [1] "Paid INR 1,500\r\n                        " 
##  [2] "Paid INR 2,400\r\n                        " 
##  [3] "Paid INR 5,000\r\n                        " 
##  [4] "Paid INR 200\r\n                        "   
##  [5] "Paid INR 15,000\r\n                        "
##  [6] "Paid INR 44,000\r\n                        "
##  [7] "Paid INR 200\r\n                        "   
##  [8] "Paid INR 43,000\r\n                        "
##  [9] "Paid INR 3,000\r\n                        " 
## [10] "Paid INR 2,000\r\n                        "

We still need to do some cleaning before the data is usable:

amounts <- html_text(amounts)
(amounts <- gsub("Paid INR | |\r|\n|,", "", amounts)) # remove text, white space, and commas
##  [1] "1500"  "2400"  "5000"  "200"   "15000" "44000" "200"   "43000"
##  [9] "3000"  "2000"
(amounts <- as.numeric(amounts)) # convert to numeric
##  [1]  1500  2400  5000   200 15000 44000   200 43000  3000  2000

Let’s do another one: transactions during which the bribe ocurred

transaction <- html_nodes(bribes, ".transaction a")
(transaction <- html_text(transaction))
##  [1] "False Allegations"                   
##  [2] "Police Verification for Passport"    
##  [3] "Registration of Flat or Apartment"   
##  [4] "Police Verification for Passport"    
##  [5] "Transfer of Property"                
##  [6] "School or College Related Activities"
##  [7] "Traffic Violations"                  
##  [8] "School or College Related Activities"
##  [9] "Arrested by Police"                  
## [10] "Filing FIR"

And one more: the department that is responsible for these transactions

# and one more
dept <- html_nodes(bribes, ".name a")
(dept <- html_text(dept))
##  [1] "Police"                  "Police"                 
##  [3] "Stamps and Registration" "Passport"               
##  [5] "Stamps and Registration" "Education"              
##  [7] "Police"                  "Education"              
##  [9] "Police"                  "Police"

This was just for one page, but note that there are many pages. How do we scrape the rest? First, following the best practices on coding, we will write a function that takes the URL of each page, scrapes it, and returns the information we want.

scrape_bribe <- function(url){
    bribes <- read_html(url)
    # variables that we're interested in
    amounts <- html_text(html_nodes(bribes, ".paid-amount span"))
    amounts <- as.numeric(gsub("Paid INR | |\r|\n|,", "", amounts))
    transaction <- html_text(html_nodes(bribes, ".transaction a"))
    dept <- html_text(html_nodes(bribes, ".name a"))
    # putting together into a data frame
    df <- data.frame(
        amounts = amounts,
        transaction = transaction,
        dept = dept,
            stringsAsFactors=F)
    return(df)
}

And we will start a list of data frames, and put the data frame for the initial page in the first position of that list.

bribes <- list()
bribes[[1]] <- scrape_bribe(url)
str(bribes)
## List of 1
##  $ :'data.frame':    10 obs. of  3 variables:
##   ..$ amounts    : num [1:10] 1500 2400 5000 200 15000 44000 200 43000 3000 2000
##   ..$ transaction: chr [1:10] "False Allegations" "Police Verification for Passport" "Registration of Flat or Apartment" "Police Verification for Passport" ...
##   ..$ dept       : chr [1:10] "Police" "Police" "Stamps and Registration" "Passport" ...

How should we go about the following pages? Note that the following urls had page=XX, where XX is 10, 20, 30… So we will create a base url and then add these additional numbers. (Note that for this exercise we will only scrape the first 5 pages.)

base_url <- "http://ipaidabribe.com/reports/paid?page="
pages <- seq(0, 40, by=10)

And now we just need to loop over pages, and use the function we created earlier to scrape the information, and add it to the list. Note that we’re adding a couple of seconds between HTTP requests to avoid overloading the page, as well as a message that will informs us of the progress of the loop.

for (i in 2:length(pages)){
    # informative message about progress of loop
    message(i, '/', length(pages))
    # prepare URL
    url <- paste(base_url, pages[i], sep="")
    # scrape website
    bribes[[i]] <- scrape_bribe(url)
    # wait a couple of seconds between URL calls
    Sys.sleep(2)
}
## 2/5
## 3/5
## 4/5
## 5/5

The final step is to convert the list of data frames into a single data frame that we can work with, using the function do.call(rbind, LIST) (where LIST is a list of data frames).

bribes <- do.call(rbind, bribes)
head(bribes)
##   amounts                          transaction                    dept
## 1    1500                    False Allegations                  Police
## 2    2400     Police Verification for Passport                  Police
## 3    5000    Registration of Flat or Apartment Stamps and Registration
## 4     200     Police Verification for Passport                Passport
## 5   15000                 Transfer of Property Stamps and Registration
## 6   44000 School or College Related Activities               Education
str(bribes)
## 'data.frame':    50 obs. of  3 variables:
##  $ amounts    : num  1500 2400 5000 200 15000 44000 200 43000 3000 2000 ...
##  $ transaction: chr  "False Allegations" "Police Verification for Passport" "Registration of Flat or Apartment" "Police Verification for Passport" ...
##  $ dept       : chr  "Police" "Police" "Stamps and Registration" "Passport" ...

Let’s get some quick descriptive statistics to check everything worked. First, what is the most common transaction during which a bribe was paid?

tab <- table(bribes$transaction) # frequency table
tab <- sort(tab, decreasing=TRUE)   # sorting the table from most to least common
head(tab)
## 
##     Police Verification for Passport                   Traffic Violations 
##                                    7                                    6 
##          Customs Check and Clearance                    Police Harassment 
##                                    2                                    2 
## School or College Related Activities                         7/12 Extract 
##                                    2                                    1

What was the average bribe payment?

summary(bribes$amount)
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##       1     600    2200   22656   10000  250000

And what was the average payment for each department?

agg <- aggregate(bribes$amount, by=list(dept=bribes$dept), FUN=mean)
agg[order(agg$x, decreasing = TRUE),] # ordering from highest to lowest
##                               dept          x
## 8               Municipal Services 101450.000
## 13                        Railways  87000.000
## 5                        Education  42333.333
## 6     Electricity and Power Supply  34750.000
## 11                          Police  10829.412
## 2                          Banking  10000.000
## 4  Customs, Excise and Service Tax  10000.000
## 15         Stamps and Registration   8750.000
## 3   Commercial Tax, Sales Tax, VAT   5000.000
## 7        Health and Family Welfare   4000.000
## 16                       Transport   1333.333
## 10                        Passport   1075.000
## 9                           Others   1000.000
## 14                         Revenue   1000.000
## 17   Urban Development Authorities   1000.000
## 12                     Post Office    100.000
## 1                         Airports      1.000